438 lines
16 KiB
Org Mode
438 lines
16 KiB
Org Mode
#+TITLE: PhD Thesis
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:DRAWER:
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#+SUBTITLE: My subtitle
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#+LANGUAGE: en
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#+EMAIL: dehaeze.thomas@gmail.com
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#+AUTHOR: Dehaeze Thomas
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#+STARTUP: overview
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#+DATE: {{{time(%Y-%m-%d)}}}
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#+LATEX_CLASS: scrreprt
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#+LATEX_CLASS_OPTIONS: [a4paper, twoside, 11pt, onecolumn, bibliography=totoc, openright, appendixprefix=true]
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#+OPTIONS: num:t toc:nil ':t *:t -:t ::t <:nil author:t date:t tags:nil todo:nil |:t H:2 title:nil
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#+SELECT_TAGS: export
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#+EXCLUDE_TAGS: noexport
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#+BIND: org-latex-bib-compiler "biber"
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#+LATEX_HEADER: \input{config.tex}
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#+LATEX_HEADER_EXTRA: \input{config_extra.tex}
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#+LATEX_HEADER_EXTRA: \addbibresource{ref.bib}
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#+PROPERTY: header-args:latex :headers '("\\usepackage{tikz}" "\\usepackage{import}" "\\import{$HOME/Cloud/tikz/org/}{config.tex}")
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#+PROPERTY: header-args:latex+ :imagemagick t :fit yes
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#+PROPERTY: header-args:latex+ :iminoptions -scale 100% -density 150
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#+PROPERTY: header-args:latex+ :imoutoptions -quality 100
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#+PROPERTY: header-args:latex+ :results file raw replace
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#+PROPERTY: header-args:latex+ :buffer no
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#+PROPERTY: header-args:latex+ :eval no-export
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#+PROPERTY: header-args:latex+ :exports results
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#+PROPERTY: header-args:latex+ :mkdirp yes
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#+PROPERTY: header-args:latex+ :output-dir figs
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#+PROPERTY: header-args:latex+ :post pdf2svg(file=*this*, ext="png")
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:END:
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* Build :noexport:
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#+NAME: startblock
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#+BEGIN_SRC emacs-lisp :results none
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(add-to-list 'org-latex-classes
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'("scrreprt"
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"\\documentclass{scrreprt}"
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("\\chapter{%s}" . "\\chapter*{%s}")
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("\\section{%s}" . "\\section*{%s}")
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("\\subsection{%s}" . "\\subsection*{%s}")
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("\\subsubsection{%s}" . "\\subsubsection*{%s}")
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("\\paragraph{%s}" . "\\paragraph*{%s}")
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))
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;; Remove all org comments in the output LaTeX file
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(defun delete-org-comments (backend)
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(loop for comment in (reverse (org-element-map (org-element-parse-buffer)
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'comment 'identity))
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do
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(setf (buffer-substring (org-element-property :begin comment)
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(org-element-property :end comment))
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"")))
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;; Add to export hook
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(add-hook 'org-export-before-processing-hook 'delete-org-comments)
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;; Use no package by default
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(setq org-latex-packages-alist nil)
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(setq org-latex-default-packages-alist nil)
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;; Do not include the subtitle inside the title
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(setq org-latex-subtitle-separate t)
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(setq org-latex-subtitle-format "\\subtitle{%s}")
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#+END_SRC
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#+begin_src emacs-lisp
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(let ((org-export-before-parsing-hook '(org-ref-glossary-before-parsing
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org-ref-acronyms-before-parsing)))
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(org-latex-export-to-latex))
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#+end_src
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* Glossary and Acronyms - Tables :ignore:
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#+name: glossary
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| label | name | description |
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|-------+-------------------+-----------------------|
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| ka | \ensuremath{k_a} | Actuator Stiffness in |
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| phi | \ensuremath{\phi} | A woody bush |
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#+name: acronyms
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| key | abbreviation | full form |
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|------+--------------+----------------------------------|
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| mimo | MIMO | Multiple-Inputs Multiple-Outputs |
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| siso | SISO | Single-Input Single-Output |
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| nass | NASS | Nano Active Stabilization System |
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| lti | LTI | Linear Time Invariant |
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* Title Page :ignore:
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#+begin_export latex
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\begin{titlepage}
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\vspace*{5cm}
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\makeatletter
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\begin{center}
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\begin{Huge}
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\@title
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\end{Huge}\\[0.1cm]
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%
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\begin{Large}
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\@subtitle
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\end{Large}\\
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%
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\emph{by}\\
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\@author
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%
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\vfill
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A document submitted in partial fulfillment
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of the requirements for the degree of\\
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\emph{Technical Report}\\
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at\\
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\textsc{Miskatonic University}
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\end{center}
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\makeatother
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\end{titlepage}
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\newpage
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\null
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\thispagestyle{empty}
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\newpage
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#+end_export
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* Abstract
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:PROPERTIES:
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:UNNUMBERED: notoc
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:END:
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* Résumé
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:PROPERTIES:
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:UNNUMBERED: notoc
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:END:
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* Acknowledgments
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:PROPERTIES:
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:UNNUMBERED: notoc
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:END:
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* Table of Contents :ignore:
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#+begin_export latex
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\dominitoc
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\tableofcontents
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\listoftables
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\listoffigures
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#+end_export
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* Introduction
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* Test
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\minitoc
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** Test
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- acronyms acrshort:nass acrshort:mimo acrshort:lti [[acrfull:siso][Single-Input Single-Output (SISO)]]
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- glossary terms gls:ka, gls:phi.
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- Bibliography citations: [[cite:&dehaeze21_activ_dampin_rotat_platf_using;&dehaeze21_mechat_approac_devel_nano_activ_stabil_system]].
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Some Footnote[fn:1]
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** blabla
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*** sdlfk
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*** sldkjf asdf
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**** lksdfjasd
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**** lksdfjasd
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**** lksdfjasd
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** blabla
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* Source Blocks
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** Matlab Init :noexport:ignore:
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#+begin_src matlab :tangle no :exports none :results silent :noweb yes :var current_dir=(file-name-directory buffer-file-name)
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<<matlab-dir>>
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#+end_src
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#+begin_src matlab :exports none :results silent :noweb yes
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<<matlab-init>>
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#+end_src
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** Figures
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#+begin_src matlab
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t = 0:0.01:5; % Time [s]
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x = sin(2*pi*t); % Output Voltage [V]
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#+end_src
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#+begin_src matlab
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figure;
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plot(t, x);
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xlabel('Time [s]'); ylabel('Voltage [V]');
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#+end_src
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#+begin_src matlab :tangle no :exports results :results file replace
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exportFig('figs/matlab_fig_example.pdf', 'width', 'wide', 'height', 'normal');
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#+end_src
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#+name: fig:matlab_fig_example
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#+caption: Matlab Figure
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#+RESULTS:
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[[file:figs/matlab_fig_example.png]]
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** Table Result
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#+begin_src matlab
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x = 1:10;
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y = x.^2;
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#+end_src
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#+begin_src matlab :exports results :results value table replace :tangle no :post addhdr(*this*)
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data2orgtable([x', y'], {}, {'$x$', '$y = x^2$'}, ' %.0f ');
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#+end_src
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#+name: tab:table_name
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#+caption: Table caption
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#+RESULTS:
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| $x$ | $y = x^2$ |
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|-----+-----------|
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| 1 | 1 |
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| 2 | 4 |
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| 3 | 9 |
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| 4 | 16 |
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| 5 | 25 |
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| 6 | 36 |
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| 7 | 49 |
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| 8 | 64 |
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| 9 | 81 |
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| 10 | 100 |
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** Inline Results
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Results can be automatically outputed as shown below.
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#+begin_src matlab :results value replace
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sqrt(2)
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#+end_src
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#+RESULTS:
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: 1.4142
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#+begin_src matlab :results output replace
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y
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#+end_src
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#+RESULTS:
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: y =
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: 1 4 9 16 25 36 49 64 81 100
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** Caption and Reference
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Captions can be added to code blocks.
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Moreover, we can link to specific bode blocks (Listing [[lst:matlab_figure]] or [[lst:matlab_svd]]).
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#+name: lst:matlab_figure
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#+caption: Code to produce a nice contour plot
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#+begin_src matlab
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figure;
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[X,Y,Z] = peaks;
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contour(X,Y,Z,20)
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#+end_src
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#+begin_src matlab :tangle no :exports results :results file replace
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exportFig('figs/matlab_logo.pdf', 'width', 'small', 'height', 'normal');
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#+end_src
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#+name: fig:matlab_logo
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#+caption: Obtained Contour Plot
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#+RESULTS:
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[[file:figs/matlab_logo.png]]
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#+name: lst:matlab_svd
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#+caption: Code to compute the Singular Value Decomposition
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#+begin_src matlab :results output replace
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A = [1 2; 3 4; 5 6; 7 8]
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[U,S,V] = svd(A)
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#+end_src
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#+RESULTS:
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#+begin_example
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A = [1 2; 3 4; 5 6; 7 8]
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A =
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1 2
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3 4
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5 6
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7 8
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[U,S,V] = svd(A)
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U =
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-0.152483233310201 -0.82264747222566 -0.394501022283829 -0.379959133877596
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-0.349918371807964 -0.42137528768458 0.242796545704357 0.800655879510063
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-0.547353510305727 -0.0201031031435029 0.697909975442776 -0.461434357387336
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-0.74478864880349 0.381169081397575 -0.546205498863303 0.0407376117548695
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S =
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14.2690954992615 0
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0 0.626828232417541
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0 0
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0 0
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V =
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-0.641423027995072 0.767187395072177
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-0.767187395072177 -0.641423027995072
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#+end_example
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** Source Blocks with Line Numbers
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Citation [[cite:&taghirad13_paral;&dehaeze21_activ_dampin_rotat_platf_using]]
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The Listing [[lst:matlab_line_numbers]] has line numbers as the =-n= option was used.
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Specific lines of codes can be referenced.
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For instance, the code used to specify the wanted the vertical label is on line [[(test)]].
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#+name: lst:matlab_line_numbers
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#+caption: Specify Labels
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#+begin_src matlab +n -r
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figure;
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plot(t, x)
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xlabel('Time [s]');
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ylabel('Output [V]'); (ref:test)
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#+end_src
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Numbering can be continued by using =+n= option as shown below.
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#+begin_src matlab +n
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figure;
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plot(t, u)
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xlabel('Time [s]');
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ylabel('Input [V]');
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#+end_src
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* Images
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** Normal Image
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Figure [[fig:general_control_names]] shows the results of the Tikz code of listing [[lst:tikz_test]].
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#+name: lst:tikz_test
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#+caption: Tikz code that is used to generate Figure [[fig:general_control_names]]
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#+begin_src latex :file general_control_names.pdf :exports both
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\begin{tikzpicture}
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% Blocs
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\node[block={2.0cm}{2.0cm}] (P) {$P$};
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\node[block={1.5cm}{1.5cm}, below=0.7 of P] (K) {$K$};
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% Input and outputs coordinates
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\coordinate[] (inputw) at ($(P.south west)!0.75!(P.north west)$);
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\coordinate[] (inputu) at ($(P.south west)!0.25!(P.north west)$);
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\coordinate[] (outputz) at ($(P.south east)!0.75!(P.north east)$);
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\coordinate[] (outputv) at ($(P.south east)!0.25!(P.north east)$);
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% Connections and labels
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\draw[<-] (inputw) node[above left, align=right]{(weighted)\\exogenous inputs\\$w$} -- ++(-1.5, 0);
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\draw[<-] (inputu) -- ++(-0.8, 0) |- node[left, near start, align=right]{control signals\\$u$} (K.west);
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\draw[->] (outputz) node[above right, align=left]{(weighted)\\exogenous outputs\\$z$} -- ++(1.5, 0);
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\draw[->] (outputv) -- ++(0.8, 0) |- node[right, near start, align=left]{sensed output\\$v$} (K.east);
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\end{tikzpicture}
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#+end_src
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#+name: fig:general_control_names
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#+caption: General Control Configuration
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#+RESULTS: lst:tikz_test
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[[file:figs/general_control_names.png]]
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** Sub Images
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Link to subfigure [[fig:general_control_names_1]].
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#+name: fig:subfigure
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#+caption: Subfigure Caption
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#+attr_latex: :environment subfigure :width 0.49\linewidth :align c
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| file:figs/general_control_names.png | file:figs/general_control_names.png |
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| <<fig:general_control_names_1>> sub figure caption | <<fig:general_control_names_2>> sub figure caption |
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* Tables
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Table [[tab:table_with_equations]] shows a table with some mathematics inside.
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#+name: tab:table_with_equations
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#+caption: A Simple table with included math
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| $N$ | $N^2$ | $N^3$ | $N^4$ | $\sqrt n$ | $\sqrt[4]N$ |
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|-----+-------+-------+-------+-----------+-------------|
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| 1 | 1 | 1 | 1 | 1 | 1 |
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| 2 | 4 | 8 | 16 | 1.4142136 | 1.1892071 |
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| 3 | 9 | 27 | 81 | 1.7320508 | 1.3160740 |
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#+TBLFM: $2=$1^2::$3=$1^3::$4=$1^4::$5=sqrt($1)::$6=sqrt(sqrt(($1)))
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#+name: tab:table_without_head
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#+caption: Table without Head
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| | *1* | *2* | *3* | *4* | *5* |
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| *1* | 1 | 2 | 3 | 4 | 5 |
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| *2* | 2 | 4 | 6 | 8 | 10 |
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| *3* | 3 | 6 | 9 | 12 | 15 |
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| *4* | 4 | 8 | 12 | 16 | 20 |
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| *5* | 5 | 10 | 15 | 20 | 25 |
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#+name: tab:table_multiple_heads
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#+ATTR_LATEX: :font \footnotesize
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#+caption: Table with multiples groups
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| | *Classical Control* | *Modern Control* | *Robust Control* |
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| <l> | <c> | <c> | <c> |
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|-------------------------+------------------------------------+--------------------------------------+-------------------------------------------------------------------------|
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| *Date* | 1930- | 1960- | 1980- |
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|-------------------------+------------------------------------+--------------------------------------+-------------------------------------------------------------------------|
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| *Tools* | Transfer Functions | State Space formulation | Disk margin |
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| | Nyquist Plots | Riccati Equations | Systems and Signals Norms ($\mathcal{H}_\infty$, $\mathcal{H}_2$ Norms) |
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| | Bode Plots | | Closed Loop Transfer Functions |
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| | Phase and Gain margins | | Weighting Functions |
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|-------------------------+------------------------------------+--------------------------------------+-------------------------------------------------------------------------|
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| *Control Architectures* | Proportional, Integral, Derivative | Full State Feedback | General Control Configuration |
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| | Leads, Lags | LQR, LQG | |
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| | | Kalman Filters | |
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|-------------------------+------------------------------------+--------------------------------------+-------------------------------------------------------------------------|
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| *Advantages* | Study Stability | Automatic Synthesis | Automatic Synthesis |
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| | Simple | MIMO | MIMO |
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| | Natural | Optimization Problem | Optimization Problem |
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| | | | Guaranteed Robustness |
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| | | | Easy specification of performances |
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|-------------------------+------------------------------------+--------------------------------------+-------------------------------------------------------------------------|
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| *Disadvantages* | Manual Method | No Guaranteed Robustness | Required knowledge of specific tools |
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| | Only SISO | Difficult Rejection of Perturbations | Need a reasonably good model of the system |
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* Bibliography :ignore:
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#+latex: \printbibliography[heading=bibintoc,title={Bibliography}]
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* Glossary :ignore:
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#+latex: \printglossary[type=\acronymtype]
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#+latex: \printglossary
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* Appendix :ignore:
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#+latex: \appendix
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* Mathematical formulas
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* Comments on something
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* Footnotes
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[fn:1]this is a footnote with citation [[cite:&dehaeze21_mechat_approac_devel_nano_activ_stabil_system]].
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