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201 changed files with 58048 additions and 3116 deletions

308
.gitignore vendored
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# -*- mode: gitignore; -*- mat/
*~ figures/
\#*\# ltximg/
/.emacs.desktop slprj/
/.emacs.desktop.lock matlab/slprj/
*.elc *.slxc
auto-save-list
tramp
.\#*
# Org-mode
.org-id-locations
*_archive
# flymake-mode # ============================================================
*_flymake.* # ============================================================
# LATEX
# ============================================================
# ============================================================
# eshell files ## Core latex/pdflatex auxiliary files:
/eshell/history
/eshell/lastdir
# elpa packages
/elpa/
# reftex files
*.rel
# AUCTeX auto folder
/auto/
# cask packages
.cask/
dist/
# Flycheck
flycheck_*.el
# server auth directory
/server/
# projectiles files
.projectile
# directory configuration
.dir-locals.el
# network security
/network-security.data
# bibtex
*.aux *.aux
*.bbl *.lof
*.blg *.log
*.lot
*.fls
*.out
*.toc
*.fmt
*.fot
*.cb
*.cb2
.*.lb
# Simulink ## Intermediate documents:
*.autosave *.dvi
*.original *.xdv
slprj/ *-converted-to.*
# these rules might exclude image files for figures etc.
# *.ps
# *.eps
# *.pdf
## Generated if empty string is given at "Please type another file name for output:"
.pdf
## Bibliography auxiliary files (bibtex/biblatex/biber):
*.bbl
*.bcf
*.blg
*-blx.aux
*-blx.bib
*.run.xml
## Build tool auxiliary files:
*.fdb_latexmk
*.synctex
*.synctex(busy)
*.synctex.gz
*.synctex.gz(busy)
*.pdfsync
## Build tool directories for auxiliary files
# latexrun
latex.out/
## Auxiliary and intermediate files from other packages:
# algorithms
*.alg
*.loa
# achemso
acs-*.bib
# amsthm
*.thm
# beamer
*.nav
*.pre
*.snm
*.vrb
# changes
*.soc
# cprotect
*.cpt
# elsarticle (documentclass of Elsevier journals)
*.spl
# endnotes
*.ent
# fixme
*.lox
# feynmf/feynmp
*.mf
*.mp
*.t[1-9]
*.t[1-9][0-9]
*.tfm
#(r)(e)ledmac/(r)(e)ledpar
*.end
*.?end
*.[1-9]
*.[1-9][0-9]
*.[1-9][0-9][0-9]
*.[1-9]R
*.[1-9][0-9]R
*.[1-9][0-9][0-9]R
*.eledsec[1-9]
*.eledsec[1-9]R
*.eledsec[1-9][0-9]
*.eledsec[1-9][0-9]R
*.eledsec[1-9][0-9][0-9]
*.eledsec[1-9][0-9][0-9]R
# glossaries
*.acn
*.acr
*.glg
*.glo
*.gls
*.glsdefs
# gnuplottex
*-gnuplottex-*
# gregoriotex
*.gaux
*.gtex
# htlatex
*.4ct
*.4tc
*.idv
*.lg
*.trc
*.xref
# hyperref
*.brf
# knitr
*-concordance.tex
# TODO Comment the next line if you want to keep your tikz graphics files
*.tikz
*-tikzDictionary
# listings
*.lol
# makeidx
*.idx
*.ilg
*.ind
*.ist
# minitoc
*.maf
*.mlf
*.mlt
*.mtc[0-9]*
*.slf[0-9]*
*.slt[0-9]*
*.stc[0-9]*
# minted
_minted*
*.pyg
# morewrites
*.mw
# nomencl
*.nlg
*.nlo
*.nls
# pax
*.pax
# pdfpcnotes
*.pdfpc
# sagetex
*.sagetex.sage
*.sagetex.py
*.sagetex.scmd
# scrwfile
*.wrt
# sympy
*.sout
*.sympy
sympy-plots-for-*.tex/
# pdfcomment
*.upa
*.upb
# pythontex
*.pytxcode
pythontex-files-*/
# thmtools
*.loe
# TikZ & PGF
*.dpth
*.md5
*.auxlock
# todonotes
*.tdo
# easy-todo
*.lod
# xmpincl
*.xmpi
# xindy
*.xdy
# xypic precompiled matrices
*.xyc
# endfloat
*.ttt
*.fff
# Latexian
TSWLatexianTemp*
## Editors:
# WinEdt
*.bak
*.sav
# Texpad
.texpadtmp
# LyX
*.lyx~
# Kile
*.backup
# KBibTeX
*~[0-9]*
# auto folder when using emacs and auctex
./auto/*
*.el
# expex forward references with \gathertags
*-tags.tex
# standalone packages
*.sta

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.latexmkrc Normal file
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#!/bin/env perl
# Shebang is only to get syntax highlighting right across GitLab, GitHub and IDEs.
# This file is not meant to be run, but read by `latexmk`.
# ======================================================================================
# Perl `latexmk` configuration file
# ======================================================================================
# ======================================================================================
# PDF Generation/Building/Compilation
# ======================================================================================
@default_files=('nass-rotating-3dof-model.tex');
# PDF-generating modes are:
# 1: pdflatex, as specified by $pdflatex variable (still largely in use)
# 2: postscript conversion, as specified by the $ps2pdf variable (useless)
# 3: dvi conversion, as specified by the $dvipdf variable (useless)
# 4: lualatex, as specified by the $lualatex variable (best)
# 5: xelatex, as specified by the $xelatex variable (second best)
$pdf_mode = 1;
# Treat undefined references and citations as well as multiply defined references as
# ERRORS instead of WARNINGS.
# This is only checked in the *last* run, since naturally, there are undefined references
# in initial runs.
# This setting is potentially annoying when debugging/editing, but highly desirable
# in the CI pipeline, where such a warning should result in a failed pipeline, since the
# final document is incomplete/corrupted.
#
# However, I could not eradicate all warnings, so that `latexmk` currently fails with
# this option enabled.
# Specifically, `microtype` fails together with `fontawesome`/`fontawesome5`, see:
# https://tex.stackexchange.com/a/547514/120853
# The fix in that answer did not help.
# Setting `verbose=silent` to mute `microtype` warnings did not work.
# Switching between `fontawesome` and `fontawesome5` did not help.
$warnings_as_errors = 0;
# Show used CPU time. Looks like: https://tex.stackexchange.com/a/312224/120853
$show_time = 1;
# Default is 5; we seem to need more owed to the complexity of the document.
# Actual documents probably don't need this many since they won't use all features,
# plus won't be compiling from cold each time.
$max_repeat=7;
# --shell-escape option (execution of code outside of latex) is required for the
#'svg' package.
# It converts raw SVG files to the PDF+PDF_TEX combo using InkScape.
#
# SyncTeX allows to jump between source (code) and output (PDF) in IDEs with support
# (many have it). A value of `1` is enabled (gzipped), `-1` is enabled but uncompressed,
# `0` is off.
# Testing in VSCode w/ LaTeX Workshop only worked for the compressed version.
# Adjust this as needed. Of course, only relevant for local use, no effect on a remote
# CI pipeline (except for slower compilation, probably).
#
# %O and %S will forward Options and the Source file, respectively, given to latexmk.
#
# `set_tex_cmds` applies to all *latex commands (latex, xelatex, lualatex, ...), so
# no need to specify these each. This allows to simply change `$pdf_mode` to get a
# different engine. Check if this works with `latexmk --commands`.
set_tex_cmds("--shell-escape -interaction=nonstopmode --synctex=1 %O %S");
# Use default pdf viewer
$pdf_previewer = 'zathura';
# option 2 is same as 1 (run biber when necessary), but also deletes the
# regeneratable bbl-file in a clenaup (`latexmk -c`). Do not use if original
# bib file is not available!
$bibtex_use = 2; # default: 1
# Change default `biber` call, help catch errors faster/clearer. See
# https://web.archive.org/web/20200526101657/https://www.semipol.de/2018/06/12/latex-best-practices.html#database-entries
$biber = "biber --validate-datamodel %O %S";
# Glossaries
add_cus_dep('glo', 'gls', 0, 'run_makeglossaries');
add_cus_dep('acn', 'acr', 0, 'run_makeglossaries');
sub run_makeglossaries {
if ( $silent ) {
system "makeglossaries -q -s '$_[0].ist' '$_[0]'";
}
else {
system "makeglossaries -s '$_[0].ist' '$_[0]'";
};
}
# ======================================================================================
# Auxiliary Files
# ======================================================================================
# Let latexmk know about generated files, so they can be used to detect if a
# rerun is required, or be deleted in a cleanup.
# loe: List of Examples (KOMAScript)
# lol: List of Listings (`listings` and `minted` packages)
# run.xml: biber runs
# glg: glossaries log
# glstex: generated from glossaries-extra
push @generated_exts, 'loe', 'lol', 'run.xml', 'glstex', 'glo', 'gls', 'glg', 'acn', 'acr', 'alg';
# Also delete the *.glstex files from package glossaries-extra. Problem is,
# that that package generates files of the form "basename-digit.glstex" if
# multiple glossaries are present. Latexmk looks for "basename.glstex" and so
# does not find those. For that purpose, use wildcard.
# Also delete files generated by gnuplot/pgfplots contour plots
# (.dat, .script, .table).
$clean_ext = "%R-*.glstex %R_contourtmp*.*";

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.org-bold { /* bold */ font-weight: bold; }
.org-bold-italic { /* bold-italic */ font-weight: bold; font-style: italic; }
.org-buffer-menu-buffer { /* buffer-menu-buffer */ font-weight: bold; }
.org-builtin { /* font-lock-builtin-face */ color: #7a378b; }
.org-button { /* button */ text-decoration: underline; }
.org-calendar-today { /* calendar-today */ text-decoration: underline; }
.org-change-log-acknowledgement { /* change-log-acknowledgement */ color: #b22222; }
.org-change-log-conditionals { /* change-log-conditionals */ color: #a0522d; }
.org-change-log-date { /* change-log-date */ color: #8b2252; }
.org-change-log-email { /* change-log-email */ color: #a0522d; }
.org-change-log-file { /* change-log-file */ color: #0000ff; }
.org-change-log-function { /* change-log-function */ color: #a0522d; }
.org-change-log-list { /* change-log-list */ color: #a020f0; }
.org-change-log-name { /* change-log-name */ color: #008b8b; }
.org-comint-highlight-input { /* comint-highlight-input */ font-weight: bold; }
.org-comint-highlight-prompt { /* comint-highlight-prompt */ color: #00008b; }
.org-comment { /* font-lock-comment-face */ color: #999988; font-style: italic; }
.org-comment-delimiter { /* font-lock-comment-delimiter-face */ color: #999988; font-style: italic; }
.org-completions-annotations { /* completions-annotations */ font-style: italic; }
.org-completions-common-part { /* completions-common-part */ color: #000000; background-color: #ffffff; }
.org-completions-first-difference { /* completions-first-difference */ font-weight: bold; }
.org-constant { /* font-lock-constant-face */ color: #008b8b; }
.org-diary { /* diary */ color: #ff0000; }
.org-diff-context { /* diff-context */ color: #7f7f7f; }
.org-diff-file-header { /* diff-file-header */ background-color: #b3b3b3; font-weight: bold; }
.org-diff-function { /* diff-function */ background-color: #cccccc; }
.org-diff-header { /* diff-header */ background-color: #cccccc; }
.org-diff-hunk-header { /* diff-hunk-header */ background-color: #cccccc; }
.org-diff-index { /* diff-index */ background-color: #b3b3b3; font-weight: bold; }
.org-diff-nonexistent { /* diff-nonexistent */ background-color: #b3b3b3; font-weight: bold; }
.org-diff-refine-change { /* diff-refine-change */ background-color: #d9d9d9; }
.org-dired-directory { /* dired-directory */ color: #0000ff; }
.org-dired-flagged { /* dired-flagged */ color: #ff0000; font-weight: bold; }
.org-dired-header { /* dired-header */ color: #228b22; }
.org-dired-ignored { /* dired-ignored */ color: #7f7f7f; }
.org-dired-mark { /* dired-mark */ color: #008b8b; }
.org-dired-marked { /* dired-marked */ color: #ff0000; font-weight: bold; }
.org-dired-perm-write { /* dired-perm-write */ color: #b22222; }
.org-dired-symlink { /* dired-symlink */ color: #a020f0; }
.org-dired-warning { /* dired-warning */ color: #ff0000; font-weight: bold; }
.org-doc { /* font-lock-doc-face */ color: #8b2252; }
.org-escape-glyph { /* escape-glyph */ color: #a52a2a; }
.org-file-name-shadow { /* file-name-shadow */ color: #7f7f7f; }
.org-flyspell-duplicate { /* flyspell-duplicate */ color: #cdad00; font-weight: bold; text-decoration: underline; }
.org-flyspell-incorrect { /* flyspell-incorrect */ color: #ff4500; font-weight: bold; text-decoration: underline; }
.org-fringe { /* fringe */ background-color: #f2f2f2; }
.org-function-name { /* font-lock-function-name-face */ color: teal; }
.org-header-line { /* header-line */ color: #333333; background-color: #e5e5e5; }
.org-help-argument-name { /* help-argument-name */ font-style: italic; }
.org-highlight { /* highlight */ background-color: #b4eeb4; }
.org-holiday { /* holiday */ background-color: #ffc0cb; }
.org-isearch { /* isearch */ color: #b0e2ff; background-color: #cd00cd; }
.org-isearch-fail { /* isearch-fail */ background-color: #ffc1c1; }
.org-italic { /* italic */ font-style: italic; }
.org-keyword { /* font-lock-keyword-face */ color: #0086b3; }
.org-lazy-highlight { /* lazy-highlight */ background-color: #afeeee; }
.org-link { /* link */ color: #0000ff; text-decoration: underline; }
.org-link-visited { /* link-visited */ color: #8b008b; text-decoration: underline; }
.org-log-edit-header { /* log-edit-header */ color: #a020f0; }
.org-log-edit-summary { /* log-edit-summary */ color: #0000ff; }
.org-log-edit-unknown-header { /* log-edit-unknown-header */ color: #b22222; }
.org-match { /* match */ background-color: #ffff00; }
.org-next-error { /* next-error */ background-color: #eedc82; }
.org-nobreak-space { /* nobreak-space */ color: #a52a2a; text-decoration: underline; }
.org-org-archived { /* org-archived */ color: #7f7f7f; }
.org-org-block { /* org-block */ color: #7f7f7f; }
.org-org-block-begin-line { /* org-block-begin-line */ color: #b22222; }
.org-org-block-end-line { /* org-block-end-line */ color: #b22222; }
.org-org-checkbox { /* org-checkbox */ font-weight: bold; }
.org-org-checkbox-statistics-done { /* org-checkbox-statistics-done */ color: #228b22; font-weight: bold; }
.org-org-checkbox-statistics-todo { /* org-checkbox-statistics-todo */ color: #ff0000; font-weight: bold; }
.org-org-clock-overlay { /* org-clock-overlay */ background-color: #ffff00; }
.org-org-code { /* org-code */ color: #7f7f7f; }
.org-org-column { /* org-column */ background-color: #e5e5e5; }
.org-org-column-title { /* org-column-title */ background-color: #e5e5e5; font-weight: bold; text-decoration: underline; }
.org-org-date { /* org-date */ color: #a020f0; text-decoration: underline; }
.org-org-document-info { /* org-document-info */ color: #191970; }
.org-org-document-info-keyword { /* org-document-info-keyword */ color: #7f7f7f; }
.org-org-document-title { /* org-document-title */ color: #191970; font-size: 144%; font-weight: bold; }
.org-org-done { /* org-done */ color: #228b22; font-weight: bold; }
.org-org-drawer { /* org-drawer */ color: #0000ff; }
.org-org-ellipsis { /* org-ellipsis */ color: #b8860b; text-decoration: underline; }
.org-org-footnote { /* org-footnote */ color: #a020f0; text-decoration: underline; }
.org-org-formula { /* org-formula */ color: #b22222; }
.org-org-headline-done { /* org-headline-done */ color: #bc8f8f; }
.org-org-hide { /* org-hide */ color: #ffffff; }
.org-org-latex-and-export-specials { /* org-latex-and-export-specials */ color: #8b4513; }
.org-org-level-1 { /* org-level-1 */ color: #0000ff; }
.org-org-level-2 { /* org-level-2 */ color: #a0522d; }
.org-org-level-3 { /* org-level-3 */ color: #a020f0; }
.org-org-level-4 { /* org-level-4 */ color: #b22222; }
.org-org-level-5 { /* org-level-5 */ color: #228b22; }
.org-org-level-6 { /* org-level-6 */ color: #008b8b; }
.org-org-level-7 { /* org-level-7 */ color: #7a378b; }
.org-org-level-8 { /* org-level-8 */ color: #8b2252; }
.org-org-link { /* org-link */ color: #0000ff; text-decoration: underline; }
.org-org-meta-line { /* org-meta-line */ color: #b22222; }
.org-org-mode-line-clock { /* org-mode-line-clock */ color: #000000; background-color: #bfbfbf; }
.org-org-mode-line-clock-overrun { /* org-mode-line-clock-overrun */ color: #000000; background-color: #ff0000; }
.org-org-quote { /* org-quote */ color: #7f7f7f; }
.org-org-scheduled { /* org-scheduled */ color: #006400; }
.org-org-scheduled-previously { /* org-scheduled-previously */ color: #b22222; }
.org-org-scheduled-today { /* org-scheduled-today */ color: #006400; }
.org-org-sexp-date { /* org-sexp-date */ color: #a020f0; }
.org-org-special-keyword { /* org-special-keyword */ color: #a020f0; }
.org-org-table { /* org-table */ color: #0000ff; }
.org-org-tag { /* org-tag */ font-weight: bold; }
.org-org-target { /* org-target */ text-decoration: underline; }
.org-org-time-grid { /* org-time-grid */ color: #b8860b; }
.org-org-todo { /* org-todo */ color: #ff0000; font-weight: bold; }
.org-org-upcoming-deadline { /* org-upcoming-deadline */ color: #b22222; }
.org-org-verbatim { /* org-verbatim */ color: #7f7f7f; }
.org-org-verse { /* org-verse */ color: #7f7f7f; }
.org-org-warning { /* org-warning */ color: #ff0000; font-weight: bold; }
.org-outline-1 { /* outline-1 */ color: #0000ff; }
.org-outline-2 { /* outline-2 */ color: #a0522d; }
.org-outline-3 { /* outline-3 */ color: #a020f0; }
.org-outline-4 { /* outline-4 */ color: #b22222; }
.org-outline-5 { /* outline-5 */ color: #228b22; }
.org-outline-6 { /* outline-6 */ color: #008b8b; }
.org-outline-7 { /* outline-7 */ color: #7a378b; }
.org-outline-8 { /* outline-8 */ color: #8b2252; }
.org-preprocessor { /* font-lock-preprocessor-face */ color: #7a378b; }
.org-query-replace { /* query-replace */ color: #b0e2ff; background-color: #cd00cd; }
.org-regexp-grouping-backslash { /* font-lock-regexp-grouping-backslash */ font-weight: bold; }
.org-regexp-grouping-construct { /* font-lock-regexp-grouping-construct */ font-weight: bold; }
.org-region { /* region */ background-color: #eedc82; }
.org-secondary-selection { /* secondary-selection */ background-color: #ffff00; }
.org-shadow { /* shadow */ color: #7f7f7f; }
.org-show-paren-match { /* show-paren-match */ background-color: #40e0d0; }
.org-show-paren-mismatch { /* show-paren-mismatch */ color: #ffffff; background-color: #a020f0; }
.org-string { /* font-lock-string-face */ color: #dd1144; }
.org-tool-bar { /* tool-bar */ color: #000000; background-color: #bfbfbf; }
.org-tooltip { /* tooltip */ color: #000000; background-color: #ffffe0; }
.org-trailing-whitespace { /* trailing-whitespace */ background-color: #ff0000; }
.org-type { /* font-lock-type-face */ color: #228b22; }
.org-underline { /* underline */ text-decoration: underline; }
.org-variable-name { /* font-lock-variable-name-face */ color: teal; }
.org-warning { /* font-lock-warning-face */ color: #ff0000; font-weight: bold; }
.org-widget-button { /* widget-button */ font-weight: bold; }
.org-widget-button-pressed { /* widget-button-pressed */ color: #ff0000; }
.org-widget-documentation { /* widget-documentation */ color: #006400; }
.org-widget-field { /* widget-field */ background-color: #d9d9d9; }
.org-widget-inactive { /* widget-inactive */ color: #7f7f7f; }
.org-widget-single-line-field { /* widget-single-line-field */ background-color: #d9d9d9; }

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