.gitignore

@@ -1,260 +1,58 @@
-mat/
+# -*- mode: gitignore; -*-
-figures/
+*~
-ltximg/
+\#*\#
-slprj/
+/.emacs.desktop
-matlab/slprj/
+/.emacs.desktop.lock
-*.slxc
+*.elc
+auto-save-list
+tramp
+.\#*
 
+# Org-mode
+.org-id-locations
+*_archive
 
-# ============================================================
+# flymake-mode
-# ============================================================
+*_flymake.*
-# LATEX
-# ============================================================
-# ============================================================
 
-## Core latex/pdflatex auxiliary files:
+# eshell files
+/eshell/history
+/eshell/lastdir
+
+# elpa packages
+/elpa/
+
+# reftex files
+*.rel
+
+# AUCTeX auto folder
+/auto/
+
+# cask packages
+.cask/
+dist/
+
+# Flycheck
+flycheck_*.el
+
+# server auth directory
+/server/
+
+# projectiles files
+.projectile
+
+# directory configuration
+.dir-locals.el
+
+# network security
+/network-security.data
+
+# bibtex
 *.aux
-*.lof
-*.log
-*.lot
-*.fls
-*.out
-*.toc
-*.fmt
-*.fot
-*.cb
-*.cb2
-.*.lb
-
-## Intermediate documents:
-*.dvi
-*.xdv
-*-converted-to.*
-# these rules might exclude image files for figures etc.
-# *.ps
-# *.eps
-# *.pdf
-
-## Generated if empty string is given at "Please type another file name for output:"
-.pdf
-
-## Bibliography auxiliary files (bibtex/biblatex/biber):
 *.bbl
-*.bcf
 *.blg
-*-blx.aux
-*-blx.bib
-*.run.xml
 
-## Build tool auxiliary files:
+# Simulink
-*.fdb_latexmk
+*.autosave
-*.synctex
+*.original
-*.synctex(busy)
+slprj/
-*.synctex.gz
-*.synctex.gz(busy)
-*.pdfsync
-
-## Build tool directories for auxiliary files
-# latexrun
-latex.out/
-
-## Auxiliary and intermediate files from other packages:
-# algorithms
-*.alg
-*.loa
-
-# achemso
-acs-*.bib
-
-# amsthm
-*.thm
-
-# beamer
-*.nav
-*.pre
-*.snm
-*.vrb
-
-# changes
-*.soc
-
-# cprotect
-*.cpt
-
-# elsarticle (documentclass of Elsevier journals)
-*.spl
-
-# endnotes
-*.ent
-
-# fixme
-*.lox
-
-# feynmf/feynmp
-*.mf
-*.mp
-*.t[1-9]
-*.t[1-9][0-9]
-*.tfm
-
-#(r)(e)ledmac/(r)(e)ledpar
-*.end
-*.?end
-*.[1-9]
-*.[1-9][0-9]
-*.[1-9][0-9][0-9]
-*.[1-9]R
-*.[1-9][0-9]R
-*.[1-9][0-9][0-9]R
-*.eledsec[1-9]
-*.eledsec[1-9]R
-*.eledsec[1-9][0-9]
-*.eledsec[1-9][0-9]R
-*.eledsec[1-9][0-9][0-9]
-*.eledsec[1-9][0-9][0-9]R
-
-# glossaries
-*.acn
-*.acr
-*.glg
-*.glo
-*.gls
-*.glsdefs
-
-# gnuplottex
-*-gnuplottex-*
-
-# gregoriotex
-*.gaux
-*.gtex
-
-# htlatex
-*.4ct
-*.4tc
-*.idv
-*.lg
-*.trc
-*.xref
-
-# hyperref
-*.brf
-
-# knitr
-*-concordance.tex
-# TODO Comment the next line if you want to keep your tikz graphics files
-*.tikz
-*-tikzDictionary
-
-# listings
-*.lol
-
-# makeidx
-*.idx
-*.ilg
-*.ind
-*.ist
-
-# minitoc
-*.maf
-*.mlf
-*.mlt
-*.mtc[0-9]*
-*.slf[0-9]*
-*.slt[0-9]*
-*.stc[0-9]*
-
-# minted
-_minted*
-*.pyg
-
-# morewrites
-*.mw
-
-# nomencl
-*.nlg
-*.nlo
-*.nls
-
-# pax
-*.pax
-
-# pdfpcnotes
-*.pdfpc
-
-# sagetex
-*.sagetex.sage
-*.sagetex.py
-*.sagetex.scmd
-
-# scrwfile
-*.wrt
-
-# sympy
-*.sout
-*.sympy
-sympy-plots-for-*.tex/
-
-# pdfcomment
-*.upa
-*.upb
-
-# pythontex
-*.pytxcode
-pythontex-files-*/
-
-# thmtools
-*.loe
-
-# TikZ & PGF
-*.dpth
-*.md5
-*.auxlock
-
-# todonotes
-*.tdo
-
-# easy-todo
-*.lod
-
-# xmpincl
-*.xmpi
-
-# xindy
-*.xdy
-
-# xypic precompiled matrices
-*.xyc
-
-# endfloat
-*.ttt
-*.fff
-
-# Latexian
-TSWLatexianTemp*
-
-## Editors:
-# WinEdt
-*.bak
-*.sav
-
-# Texpad
-.texpadtmp
-
-# LyX
-*.lyx~
-
-# Kile
-*.backup
-
-# KBibTeX
-*~[0-9]*
-
-# auto folder when using emacs and auctex
-./auto/*
-*.el
-
-# expex forward references with \gathertags
-*-tags.tex
-
-# standalone packages
-*.sta

.latexmkrc

@@ -1,111 +0,0 @@
-#!/bin/env perl
-
-# Shebang is only to get syntax highlighting right across GitLab, GitHub and IDEs.
-# This file is not meant to be run, but read by `latexmk`.
-
-# ======================================================================================
-# Perl `latexmk` configuration file
-# ======================================================================================
-
-# ======================================================================================
-# PDF Generation/Building/Compilation
-# ======================================================================================
-
-@default_files=('nass-rotating-3dof-model.tex');
-
-# PDF-generating modes are:
-# 1: pdflatex, as specified by $pdflatex variable (still largely in use)
-# 2: postscript conversion, as specified by the $ps2pdf variable (useless)
-# 3: dvi conversion, as specified by the $dvipdf variable (useless)
-# 4: lualatex, as specified by the $lualatex variable (best)
-# 5: xelatex, as specified by the $xelatex variable (second best)
-$pdf_mode = 1;
-
-# Treat undefined references and citations as well as multiply defined references as
-# ERRORS instead of WARNINGS.
-# This is only checked in the *last* run, since naturally, there are undefined references
-# in initial runs.
-# This setting is potentially annoying when debugging/editing, but highly desirable
-# in the CI pipeline, where such a warning should result in a failed pipeline, since the
-# final document is incomplete/corrupted.
-#
-# However, I could not eradicate all warnings, so that `latexmk` currently fails with
-# this option enabled.
-# Specifically, `microtype` fails together with `fontawesome`/`fontawesome5`, see:
-# https://tex.stackexchange.com/a/547514/120853
-# The fix in that answer did not help.
-# Setting `verbose=silent` to mute `microtype` warnings did not work.
-# Switching between `fontawesome` and `fontawesome5` did not help.
-$warnings_as_errors = 0;
-
-# Show used CPU time. Looks like: https://tex.stackexchange.com/a/312224/120853
-$show_time = 1;
-
-# Default is 5; we seem to need more owed to the complexity of the document.
-# Actual documents probably don't need this many since they won't use all features,
-# plus won't be compiling from cold each time.
-$max_repeat=7;
-
-# --shell-escape option (execution of code outside of latex) is required for the
-#'svg' package.
-# It converts raw SVG files to the PDF+PDF_TEX combo using InkScape.
-#
-# SyncTeX allows to jump between source (code) and output (PDF) in IDEs with support
-# (many have it). A value of `1` is enabled (gzipped), `-1` is enabled but uncompressed,
-# `0` is off.
-# Testing in VSCode w/ LaTeX Workshop only worked for the compressed version.
-# Adjust this as needed. Of course, only relevant for local use, no effect on a remote
-# CI pipeline (except for slower compilation, probably).
-#
-# %O and %S will forward Options and the Source file, respectively, given to latexmk.
-#
-# `set_tex_cmds` applies to all *latex commands (latex, xelatex, lualatex, ...), so
-# no need to specify these each. This allows to simply change `$pdf_mode` to get a
-# different engine. Check if this works with `latexmk --commands`.
-set_tex_cmds("--shell-escape -interaction=nonstopmode --synctex=1 %O %S");
-
-# Use default pdf viewer
-$pdf_previewer = 'zathura';
-
-# option 2 is same as 1 (run biber when necessary), but also deletes the
-# regeneratable bbl-file in a clenaup (`latexmk -c`). Do not use if original
-# bib file is not available!
-$bibtex_use = 2;  # default: 1
-
-# Change default `biber` call, help catch errors faster/clearer. See
-# https://web.archive.org/web/20200526101657/https://www.semipol.de/2018/06/12/latex-best-practices.html#database-entries
-$biber = "biber --validate-datamodel %O %S";
-
-# Glossaries
-add_cus_dep('glo', 'gls', 0, 'run_makeglossaries');
-add_cus_dep('acn', 'acr', 0, 'run_makeglossaries');
-
-sub run_makeglossaries {
-  if ( $silent ) {
-    system "makeglossaries -q -s '$_[0].ist' '$_[0]'";
-  }
-  else {
-    system "makeglossaries -s '$_[0].ist' '$_[0]'";
-  };
-}
-
-# ======================================================================================
-# Auxiliary Files
-# ======================================================================================
-
-# Let latexmk know about generated files, so they can be used to detect if a
-# rerun is required, or be deleted in a cleanup.
-# loe: List of Examples (KOMAScript)
-# lol: List of Listings (`listings` and `minted` packages)
-# run.xml: biber runs
-# glg: glossaries log
-# glstex: generated from glossaries-extra
-push @generated_exts, 'loe', 'lol', 'run.xml', 'glstex', 'glo', 'gls', 'glg', 'acn', 'acr', 'alg';
-
-# Also delete the *.glstex files from package glossaries-extra. Problem is,
-# that that package generates files of the form "basename-digit.glstex" if
-# multiple glossaries are present. Latexmk looks for "basename.glstex" and so
-# does not find those. For that purpose, use wildcard.
-# Also delete files generated by gnuplot/pgfplots contour plots
-# (.dat, .script, .table).
-$clean_ext = "%R-*.glstex %R_contourtmp*.*";

css/htmlize.css

@@ -0,0 +1,145 @@
+.org-bold { /* bold */ font-weight: bold; }
+.org-bold-italic { /* bold-italic */ font-weight: bold; font-style: italic; }
+.org-buffer-menu-buffer { /* buffer-menu-buffer */ font-weight: bold; }
+.org-builtin { /* font-lock-builtin-face */ color: #7a378b; }
+.org-button { /* button */ text-decoration: underline; }
+.org-calendar-today { /* calendar-today */ text-decoration: underline; }
+.org-change-log-acknowledgement { /* change-log-acknowledgement */ color: #b22222; }
+.org-change-log-conditionals { /* change-log-conditionals */ color: #a0522d; }
+.org-change-log-date { /* change-log-date */ color: #8b2252; }
+.org-change-log-email { /* change-log-email */ color: #a0522d; }
+.org-change-log-file { /* change-log-file */ color: #0000ff; }
+.org-change-log-function { /* change-log-function */ color: #a0522d; }
+.org-change-log-list { /* change-log-list */ color: #a020f0; }
+.org-change-log-name { /* change-log-name */ color: #008b8b; }
+.org-comint-highlight-input { /* comint-highlight-input */ font-weight: bold; }
+.org-comint-highlight-prompt { /* comint-highlight-prompt */ color: #00008b; }
+.org-comment { /* font-lock-comment-face */ color: #999988; font-style: italic; }
+.org-comment-delimiter { /* font-lock-comment-delimiter-face */ color: #999988; font-style: italic; }
+.org-completions-annotations { /* completions-annotations */ font-style: italic; }
+.org-completions-common-part { /* completions-common-part */ color: #000000; background-color: #ffffff; }
+.org-completions-first-difference { /* completions-first-difference */ font-weight: bold; }
+.org-constant { /* font-lock-constant-face */ color: #008b8b; }
+.org-diary { /* diary */ color: #ff0000; }
+.org-diff-context { /* diff-context */ color: #7f7f7f; }
+.org-diff-file-header { /* diff-file-header */ background-color: #b3b3b3; font-weight: bold; }
+.org-diff-function { /* diff-function */ background-color: #cccccc; }
+.org-diff-header { /* diff-header */ background-color: #cccccc; }
+.org-diff-hunk-header { /* diff-hunk-header */ background-color: #cccccc; }
+.org-diff-index { /* diff-index */ background-color: #b3b3b3; font-weight: bold; }
+.org-diff-nonexistent { /* diff-nonexistent */ background-color: #b3b3b3; font-weight: bold; }
+.org-diff-refine-change { /* diff-refine-change */ background-color: #d9d9d9; }
+.org-dired-directory { /* dired-directory */ color: #0000ff; }
+.org-dired-flagged { /* dired-flagged */ color: #ff0000; font-weight: bold; }
+.org-dired-header { /* dired-header */ color: #228b22; }
+.org-dired-ignored { /* dired-ignored */ color: #7f7f7f; }
+.org-dired-mark { /* dired-mark */ color: #008b8b; }
+.org-dired-marked { /* dired-marked */ color: #ff0000; font-weight: bold; }
+.org-dired-perm-write { /* dired-perm-write */ color: #b22222; }
+.org-dired-symlink { /* dired-symlink */ color: #a020f0; }
+.org-dired-warning { /* dired-warning */ color: #ff0000; font-weight: bold; }
+.org-doc { /* font-lock-doc-face */ color: #8b2252; }
+.org-escape-glyph { /* escape-glyph */ color: #a52a2a; }
+.org-file-name-shadow { /* file-name-shadow */ color: #7f7f7f; }
+.org-flyspell-duplicate { /* flyspell-duplicate */ color: #cdad00; font-weight: bold; text-decoration: underline; }
+.org-flyspell-incorrect { /* flyspell-incorrect */ color: #ff4500; font-weight: bold; text-decoration: underline; }
+.org-fringe { /* fringe */ background-color: #f2f2f2; }
+.org-function-name { /* font-lock-function-name-face */ color: teal; }
+.org-header-line { /* header-line */ color: #333333; background-color: #e5e5e5; }
+.org-help-argument-name { /* help-argument-name */ font-style: italic; }
+.org-highlight { /* highlight */ background-color: #b4eeb4; }
+.org-holiday { /* holiday */ background-color: #ffc0cb; }
+.org-isearch { /* isearch */ color: #b0e2ff; background-color: #cd00cd; }
+.org-isearch-fail { /* isearch-fail */ background-color: #ffc1c1; }
+.org-italic { /* italic */ font-style: italic; }
+.org-keyword { /* font-lock-keyword-face */ color: #0086b3; }
+.org-lazy-highlight { /* lazy-highlight */ background-color: #afeeee; }
+.org-link { /* link */ color: #0000ff; text-decoration: underline; }
+.org-link-visited { /* link-visited */ color: #8b008b; text-decoration: underline; }
+.org-log-edit-header { /* log-edit-header */ color: #a020f0; }
+.org-log-edit-summary { /* log-edit-summary */ color: #0000ff; }
+.org-log-edit-unknown-header { /* log-edit-unknown-header */ color: #b22222; }
+.org-match { /* match */ background-color: #ffff00; }
+.org-next-error { /* next-error */ background-color: #eedc82; }
+.org-nobreak-space { /* nobreak-space */ color: #a52a2a; text-decoration: underline; }
+.org-org-archived { /* org-archived */ color: #7f7f7f; }
+.org-org-block { /* org-block */ color: #7f7f7f; }
+.org-org-block-begin-line { /* org-block-begin-line */ color: #b22222; }
+.org-org-block-end-line { /* org-block-end-line */ color: #b22222; }
+.org-org-checkbox { /* org-checkbox */ font-weight: bold; }
+.org-org-checkbox-statistics-done { /* org-checkbox-statistics-done */ color: #228b22; font-weight: bold; }
+.org-org-checkbox-statistics-todo { /* org-checkbox-statistics-todo */ color: #ff0000; font-weight: bold; }
+.org-org-clock-overlay { /* org-clock-overlay */ background-color: #ffff00; }
+.org-org-code { /* org-code */ color: #7f7f7f; }
+.org-org-column { /* org-column */ background-color: #e5e5e5; }
+.org-org-column-title { /* org-column-title */ background-color: #e5e5e5; font-weight: bold; text-decoration: underline; }
+.org-org-date { /* org-date */ color: #a020f0; text-decoration: underline; }
+.org-org-document-info { /* org-document-info */ color: #191970; }
+.org-org-document-info-keyword { /* org-document-info-keyword */ color: #7f7f7f; }
+.org-org-document-title { /* org-document-title */ color: #191970; font-size: 144%; font-weight: bold; }
+.org-org-done { /* org-done */ color: #228b22; font-weight: bold; }
+.org-org-drawer { /* org-drawer */ color: #0000ff; }
+.org-org-ellipsis { /* org-ellipsis */ color: #b8860b; text-decoration: underline; }
+.org-org-footnote { /* org-footnote */ color: #a020f0; text-decoration: underline; }
+.org-org-formula { /* org-formula */ color: #b22222; }
+.org-org-headline-done { /* org-headline-done */ color: #bc8f8f; }
+.org-org-hide { /* org-hide */ color: #ffffff; }
+.org-org-latex-and-export-specials { /* org-latex-and-export-specials */ color: #8b4513; }
+.org-org-level-1 { /* org-level-1 */ color: #0000ff; }
+.org-org-level-2 { /* org-level-2 */ color: #a0522d; }
+.org-org-level-3 { /* org-level-3 */ color: #a020f0; }
+.org-org-level-4 { /* org-level-4 */ color: #b22222; }
+.org-org-level-5 { /* org-level-5 */ color: #228b22; }
+.org-org-level-6 { /* org-level-6 */ color: #008b8b; }
+.org-org-level-7 { /* org-level-7 */ color: #7a378b; }
+.org-org-level-8 { /* org-level-8 */ color: #8b2252; }
+.org-org-link { /* org-link */ color: #0000ff; text-decoration: underline; }
+.org-org-meta-line { /* org-meta-line */ color: #b22222; }
+.org-org-mode-line-clock { /* org-mode-line-clock */ color: #000000; background-color: #bfbfbf; }
+.org-org-mode-line-clock-overrun { /* org-mode-line-clock-overrun */ color: #000000; background-color: #ff0000; }
+.org-org-quote { /* org-quote */ color: #7f7f7f; }
+.org-org-scheduled { /* org-scheduled */ color: #006400; }
+.org-org-scheduled-previously { /* org-scheduled-previously */ color: #b22222; }
+.org-org-scheduled-today { /* org-scheduled-today */ color: #006400; }
+.org-org-sexp-date { /* org-sexp-date */ color: #a020f0; }
+.org-org-special-keyword { /* org-special-keyword */ color: #a020f0; }
+.org-org-table { /* org-table */ color: #0000ff; }
+.org-org-tag { /* org-tag */ font-weight: bold; }
+.org-org-target { /* org-target */ text-decoration: underline; }
+.org-org-time-grid { /* org-time-grid */ color: #b8860b; }
+.org-org-todo { /* org-todo */ color: #ff0000; font-weight: bold; }
+.org-org-upcoming-deadline { /* org-upcoming-deadline */ color: #b22222; }
+.org-org-verbatim { /* org-verbatim */ color: #7f7f7f; }
+.org-org-verse { /* org-verse */ color: #7f7f7f; }
+.org-org-warning { /* org-warning */ color: #ff0000; font-weight: bold; }
+.org-outline-1 { /* outline-1 */ color: #0000ff; }
+.org-outline-2 { /* outline-2 */ color: #a0522d; }
+.org-outline-3 { /* outline-3 */ color: #a020f0; }
+.org-outline-4 { /* outline-4 */ color: #b22222; }
+.org-outline-5 { /* outline-5 */ color: #228b22; }
+.org-outline-6 { /* outline-6 */ color: #008b8b; }
+.org-outline-7 { /* outline-7 */ color: #7a378b; }
+.org-outline-8 { /* outline-8 */ color: #8b2252; }
+.org-preprocessor { /* font-lock-preprocessor-face */ color: #7a378b; }
+.org-query-replace { /* query-replace */ color: #b0e2ff; background-color: #cd00cd; }
+.org-regexp-grouping-backslash { /* font-lock-regexp-grouping-backslash */ font-weight: bold; }
+.org-regexp-grouping-construct { /* font-lock-regexp-grouping-construct */ font-weight: bold; }
+.org-region { /* region */ background-color: #eedc82; }
+.org-secondary-selection { /* secondary-selection */ background-color: #ffff00; }
+.org-shadow { /* shadow */ color: #7f7f7f; }
+.org-show-paren-match { /* show-paren-match */ background-color: #40e0d0; }
+.org-show-paren-mismatch { /* show-paren-mismatch */ color: #ffffff; background-color: #a020f0; }
+.org-string { /* font-lock-string-face */ color: #dd1144; }
+.org-tool-bar { /* tool-bar */ color: #000000; background-color: #bfbfbf; }
+.org-tooltip { /* tooltip */ color: #000000; background-color: #ffffe0; }
+.org-trailing-whitespace { /* trailing-whitespace */ background-color: #ff0000; }
+.org-type { /* font-lock-type-face */ color: #228b22; }
+.org-underline { /* underline */ text-decoration: underline; }
+.org-variable-name { /* font-lock-variable-name-face */ color: teal; }
+.org-warning { /* font-lock-warning-face */ color: #ff0000; font-weight: bold; }
+.org-widget-button { /* widget-button */ font-weight: bold; }
+.org-widget-button-pressed { /* widget-button-pressed */ color: #ff0000; }
+.org-widget-documentation { /* widget-documentation */ color: #006400; }
+.org-widget-field { /* widget-field */ background-color: #d9d9d9; }
+.org-widget-inactive { /* widget-inactive */ color: #7f7f7f; }
+.org-widget-single-line-field { /* widget-single-line-field */ background-color: #d9d9d9; }