Update emacs config

doom.org

@@ -404,10 +404,12 @@ Disable flycheck for now with orgmode buffers:
 
 ** Tramp
 #+begin_src emacs-lisp
-(add-to-list 'tramp-remote-process-environment "GIT_AUTHOR_EMAIL=thomas.dehaeze@esrf.fr")
+(after! tramp
-(add-to-list 'tramp-remote-process-environment "GIT_AUTHOR_NAME='Thomas Dehaeze'")
+  (add-to-list 'tramp-remote-process-environment "GIT_AUTHOR_EMAIL=thomas.dehaeze@esrf.fr")
-(add-to-list 'tramp-remote-process-environment "GIT_COMMITTER_EMAIL=thomas.dehaeze@esrf.fr")
+  (add-to-list 'tramp-remote-process-environment "GIT_AUTHOR_NAME='Thomas Dehaeze'")
-(add-to-list 'tramp-remote-process-environment "GIT_COMMITTER_EMAIL='Thomas Dehaeze'")
+  (add-to-list 'tramp-remote-process-environment "GIT_COMMITTER_EMAIL=thomas.dehaeze@esrf.fr")
+  (add-to-list 'tramp-remote-process-environment "GIT_COMMITTER_EMAIL='Thomas Dehaeze'")
+  )
 #+end_src
 
 ** Others
@@ -502,34 +504,28 @@ Display the real size of images and not the one set with =attr_latex: :width \li
   )
 #+end_src
 
-** Org TODO
+** TODO Org TODO
 #+begin_src emacs-lisp
 (after! org
   ;; Tags with fast selection keys
   (setq org-todo-keywords '(
-                            (sequence "TODO(t)" "NEXT(n)" "MAIL(m)" "|" "DONE(d)")
+                            (sequence "TODO(t)" "MAIL(m)" "|" "DONE(d)")
-                            (sequence "READ(r)" "BKMK(b)" "EXER(x)" "|" "DONE(d)")
+                            (sequence "READ(r)" "|" "DONE(d)")
-                            (sequence "WAIT(w@/!)" "SDAY(s)" "|" "CANC(c@/!)")
+                            (sequence "WAIT(w@/!)" "DELE(e)" "|" "CANC(c@/!)")
                             (sequence "QUES(q)" "|" "ANSW(a)")
-                            (sequence "EXAM(e)" "IDEA(i)" "|")
                             ))
 
   ;; Display of the keywords
   (setq org-todo-keyword-faces
         '(("TODO" . (:foreground "#cc241d" :weight bold)) ;; red
-          ("EXER" . (:foreground "#cc241d" :weight bold)) ;; red
-          ("NEXT" . (:foreground "#cc241d" :weight bold)) ;; red
           ("MAIL" . (:foreground "#cc241d" :weight bold)) ;; red
           ("READ" . (:foreground "#cc241d" :weight bold)) ;; red
           ("ANSW" . (:foreground "#689d6a" :weight bold)) ;; aqua
           ("DONE" . (:foreground "#689d6a" :weight bold)) ;; aqua
+          ("QUES" . (:foreground "#d65d0e" :weight bold)) ;; orange
           ("WAIT" . (:foreground "#d65d0e" :weight bold)) ;; orange
-          ("QUES" . (:foreground "#d79921" :weight bold)) ;; yellow
           ("CANC" . (:foreground "#a89984" :weight bold)) ;; grey
-          ("SDAY" . (:foreground "#98971a" :weight bold)) ;; green
+          ("DELE" . (:foreground "#98971a" :weight bold)))) ;; green
-          ("BKMK" . (:foreground "#98971a" :weight bold)) ;; green
-          ("IDEA" . (:foreground "#98971a" :weight bold)) ;; green
-          ("EXAM" . (:foreground "#98971a" :weight bold)))) ;; green
   )
 #+end_src
 
@@ -713,6 +709,36 @@ Org Agenda Custom Views
   )
 #+end_src
 
+** Synchronize Agenda with ICS
+https://200ok.ch/posts/2022-02-13_integrating_org_mode_agenda_into_other_calendar_apps.html
+
+#+begin_src emacs-lisp :tangle no
+;; Setting variables for the ics file path
+(setq org-agenda-private-local-path "~/.calendars/radicale/d2ff3f82-9cdb-7e0c-ec9e-5887da0993f4/dummy.ics")
+
+;; Define a custom command to save the org agenda to a file
+(setq org-agenda-custom-commands
+      `(("X" agenda "" nil ,(list org-agenda-private-local-path))))
+
+(defun org-agenda-export-to-ics ()
+  (setq org-agenda-files (list "~/Cloud/org/"))
+  ;; Run all custom agenda commands that have a file argument.
+  (org-batch-store-agenda-views)
+
+  ;; Org mode correctly exports TODO keywords as VTODO events in ICS.
+  ;; However, some proprietary calendars do not really work with
+  ;; standards (looking at you Google), so VTODO is ignored and only
+  ;; VEVENT is read.
+  (with-current-buffer (find-file-noselect org-agenda-private-local-path)
+    (goto-char (point-min))
+    (save-buffer)))
+#+end_src
+
+Then, use:
+#+begin_src emacs-lisp :tangle no
+(org-agenda-export-to-ics)
+#+end_src
+
 ** TODO Org Agenda HTML
 This function can be used to export the week calendar to html.
 This html page can be used as a starting page for the browser.
@@ -1953,8 +1979,8 @@ https://www.reddit.com/r/emacs/comments/d3a8or/pretty_org_tables_in_the_buffer_c
      :ni "C-c F" 'tdh-insert-link-to-previous-figure)
    (:desc "Insert Screenshot"
      :ni "C-c s" 'tdh-insert-screenshot-org-link)
-   (:desc "Insert Roam"
+   (:desc "Insert Screenshot"
-     :ni "C-c R" 'orb-insert-non-ref)
+     :ni "C-c R" 'org-roam-node-find)
    ))
 #+end_src
 
@@ -2678,6 +2704,16 @@ Nice Functions:
 (use-package! org-ref
   :after org
   :init
+  (with-eval-after-load 'ox
+    (defun my/org-ref-process-buffer--html (backend)
+      "Preprocess `org-ref' citations to HTML format.
+      Do this only if the export backend is `html' or a derivative of
+      that."
+      ;; `ox-hugo' is derived indirectly from `ox-html'.
+      ;; ox-hugo <- ox-blackfriday <- ox-md <- ox-html
+      (when (org-export-derived-backend-p backend 'html)
+        (org-ref-process-buffer 'html)))
+    (add-to-list 'org-export-before-parsing-hook #'my/org-ref-process-buffer--html))
   :config
   ;; Folder where the notes files are located (or file if just one Note file)
   (setq bibtex-completion-notes-path "~/Cloud/brain/")
@@ -2802,8 +2838,8 @@ Nice Functions:
 :NOTER_DOCUMENT: ../pdfs/%^{citekey}.pdf
 :END:
 
-,* Bibliography                                                        :ignore:
+,* Bibliography
-,#+BIBLIOGRAPHY: here
+bibliography:./biblio/references.bib
 #+end_src
 
 *** Default
@@ -2812,8 +2848,8 @@ Nice Functions:
 
 %?
 
-,* Bibliography                                                        :ignore:
+,* Bibliography
-,#+BIBLIOGRAPHY: here
+bibliography:./biblio/references.bib
 #+end_src
 
 ** Org Roam ([[https://github.com/jethrokuan/org-roam/][link]])
@@ -2863,7 +2899,7 @@ Re-Export all roam files.
 (defun tdh-org-roam-export-all ()
   "Re-exports all Org-roam files to Hugo markdown."
   (interactive)
-  (dolist (f (org-roam--list-all-files))
+  (dolist (f (org-roam--list-files "~/Cloud/brain/"))
     (with-current-buffer (find-file f)
       (when (s-contains? "SETUPFILE" (buffer-string))
         (org-hugo-export-wim-to-md)))))
@@ -3375,6 +3411,7 @@ Choose account label to feed msmtp -a option based on From header in Message buf
         +all             ; catch all popups that start with an asterix
         +defaults)       ; default popup rules
        unicode           ; extended unicode support for various languages
+       indent-guides
        vc-gutter         ; vcs diff in the fringe
        vi-tilde-fringe   ; fringe tildes to mark beyond EOB
        workspaces        ; tab emulation, persistence & separate workspaces
@@ -3467,6 +3504,12 @@ Choose account label to feed msmtp -a option based on From header in Message buf
            :files ("resources" "*.el")))
 #+end_src
 
+#+begin_src emacs-lisp
+(package! yasnippet-radical-snippets
+  :recipe (:host github :repo "Xaldew/yasnippet-radical-snippets"
+           :files (:defaults "snippets" "yasnippet-radical-snippets.el")))
+#+end_src
+
 #+begin_src emacs-lisp
 (package! igo-org
   :recipe (:host github